Ubuntu
iva package

iva 1.0.9+ds-9 source package in Ubuntu

Changelog

iva (1.0.9+ds-9) unstable; urgency=medium

  * Try to fix test failure on i386 by retrying KMC run with even less RAM.

 -- Sascha Steinbiss <email address hidden>  Sat, 08 Feb 2020 17:15:05 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section

Downloads

File Size SHA-256 Checksum
iva_1.0.9+ds-9.dsc 1.9 KiB cec191c2769357dcb860aabc65b4aee4ab1d9ea13bdbfc720702ba457fadac75
iva_1.0.9+ds.orig.tar.xz 8.3 MiB 9d820ace5e4ad8faad1f18606f00f734e448cc1a6072ee37d8a322fca07933ca
iva_1.0.9+ds-9.debian.tar.xz 4.9 KiB 6aad6a1a2154a314193c8adf9c7272c8c10609a4999ecafd1d767742434cc79b

Available diffs

No changes file available.

Binary packages built by this source

iva: iterative virus sequence assembler

 IVA is a de novo assembler designed to assemble
 virus genomes that have no repeat sequences,
 using Illumina read pairs sequenced from mixed
 populations at extremely high depth.
 .
 IVA's main algorithm works by iteratively extending
 contigs using aligned read pairs. Its input can be
 just read pairs, or additionally you can provide an
 existing set of contigs to be extended. Alternatively,
 it can take reads together with a reference sequence.