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libfastahack package

libfastahack 1.0.0+dfsg-5 source package in Ubuntu

Changelog

libfastahack (1.0.0+dfsg-5) unstable; urgency=medium

  * Team upload.
  * Breaks+Replaces: libfastahack0 (<< 1.0.0+dfsg-4)

 -- Michael R. Crusoe <email address hidden>  Fri, 10 Jan 2020 19:40:17 +0100

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section

Downloads

File Size SHA-256 Checksum
libfastahack_1.0.0+dfsg-5.dsc 2.1 KiB ef97d102ca2de77a1b68ce28dfcd4583749b05f2be8e9753140b8e69115d7156
libfastahack_1.0.0+dfsg.orig.tar.xz 8.9 KiB 41e512b34158564ae83355a1e11a5ae366f3ca9ac4a31ef80f3f26f3438a91af
libfastahack_1.0.0+dfsg-5.debian.tar.xz 6.8 KiB 083c9c54d706e93371226803a47adf7a61897923de3c335c5ac07079ef0e485b

Available diffs

No changes file available.

Binary packages built by this source

fastahack: utility for indexing and sequence extraction from FASTA files

 fastahack is a small application for indexing and extracting sequences and
 subsequences from FASTA files. The included Fasta.cpp library provides a FASTA
 reader and indexer that can be embedded into applications which would benefit
 from directly reading subsequences from FASTA files. The library automatically
 handles index file generation and use.
 .
 Features:
  * FASTA index (.fai) generation for FASTA files
  * Sequence extraction
  * Subsequence extraction
  * Sequence statistics (currently only entropy is provided)
 .
 Sequence and subsequence extraction use fseek64 to provide fastest-possible
 extraction without RAM-intensive file loading operations. This makes fastahack
 a useful tool for bioinformaticists who need to quickly extract many
 subsequences from a reference FASTA sequence.

fastahack-dbgsym: debug symbols for fastahack
libfastahack-dev: library for indexing and sequence extraction from FASTA files (devel)

 fastahack is a small application for indexing and extracting sequences and
 subsequences from FASTA files. The included Fasta.cpp library provides a FASTA
 reader and indexer that can be embedded into applications which would benefit
 from directly reading subsequences from FASTA files. The library automatically
 handles index file generation and use.
 .
 Features:
  * FASTA index (.fai) generation for FASTA files
  * Sequence extraction
  * Subsequence extraction
  * Sequence statistics (currently only entropy is provided)
 .
 Sequence and subsequence extraction use fseek64 to provide fastest-possible
 extraction without RAM-intensive file loading operations. This makes fastahack
 a useful tool for bioinformaticists who need to quickly extract many
 subsequences from a reference FASTA sequence.
 .
 This is the development package containing the statically linked
 library and the header files.

libfastahack0: library for indexing and sequence extraction from FASTA files (lib)

 fastahack is a small application for indexing and extracting sequences and
 subsequences from FASTA files. The included Fasta.cpp library provides a FASTA
 reader and indexer that can be embedded into applications which would benefit
 from directly reading subsequences from FASTA files. The library automatically
 handles index file generation and use.
 .
 Features:
  * FASTA index (.fai) generation for FASTA files
  * Sequence extraction
  * Subsequence extraction
  * Sequence statistics (currently only entropy is provided)
 .
 Sequence and subsequence extraction use fseek64 to provide fastest-possible
 extraction without RAM-intensive file loading operations. This makes fastahack
 a useful tool for bioinformaticists who need to quickly extract many
 subsequences from a reference FASTA sequence.
 .
 This package contains the dynamic library.

libfastahack0-dbgsym: debug symbols for libfastahack0