Ubuntu
libseqlib package

libseqlib 1.2.0+dfsg-9 source package in Ubuntu

Changelog

libseqlib (1.2.0+dfsg-9) unstable; urgency=medium

  * d/control: add myself to uploaders.
  * d/libseqlib2.symbols.amd64: refresh list of optional symbols.
    Closes: #1012992
  * Standards-Version: 4.6.1 (routine-update)

 -- Étienne Mollier <email address hidden>  Wed, 13 Jul 2022 07:34:09 +0200

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Lunar release universe misc
Kinetic release universe misc

Downloads

File Size SHA-256 Checksum
libseqlib_1.2.0+dfsg-9.dsc 2.3 KiB c8633af2938ed9eb1d0808e667b612964929bab9ba7a9da9c80153c0c3b265ca
libseqlib_1.2.0+dfsg.orig.tar.xz 145.5 KiB 408ee92e5041ff45d9d259d1507ef783e74c565d02e0c623ef0a67a7c387b953
libseqlib_1.2.0+dfsg-9.debian.tar.xz 14.8 KiB 31ffae5e373c3977c90df89fc379590093bfa97bd842e2f75762539e4b1510f8

No changes file available.

Binary packages built by this source

libseqlib-dev: C++ htslib/bwa-mem/fermi interface for interrogating sequence data (dev)

 C++ API and command line tool that provides a rapid and user-friendly
 interface to BAM/SAM/CRAM files, global sequence alignment operations
 and sequence assembly. Four C libraries perform core operations in
 SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment
 and Fermi for error correction and sequence assembly. Benchmarking
 indicates that SeqLib has lower CPU and memory requirements than leading
 C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct
 and assemble reads from a CRAM file and then align with BWA-MEM.
 SeqLib also provides additional capabilities, including chromosome-aware
 interval queries and read plotting. Command line tools are available for
 performing integrated error correction, micro-assemblies and alignment.
 .
 This package contains the header files and static library.

libseqlib2: C++ htslib/bwa-mem/fermi interface for interrogating sequence data

 C++ API and command line tool that provides a rapid and user-friendly
 interface to BAM/SAM/CRAM files, global sequence alignment operations
 and sequence assembly. Four C libraries perform core operations in
 SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment
 and Fermi for error correction and sequence assembly. Benchmarking
 indicates that SeqLib has lower CPU and memory requirements than leading
 C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct
 and assemble reads from a CRAM file and then align with BWA-MEM.
 SeqLib also provides additional capabilities, including chromosome-aware
 interval queries and read plotting. Command line tools are available for
 performing integrated error correction, micro-assemblies and alignment.

libseqlib2-dbgsym: debug symbols for libseqlib2