ncbi-tools6 6.1.20160908-1 source package in Ubuntu

Changelog

ncbi-tools6 (6.1.20160908-1) unstable; urgency=medium

  [ Andreas Tille ]
  * (Final) new upstream release, incorporating most Debian changes, adding
    HTTPS support, and desupporting legacy BLAST.  (Closes: #846477, #821075.)
  * cme fix dpkg-control
  * drop -dbg packages since these will be created automatically
  * Fixed watch file (thanks to Eriberto <email address hidden>)
  * DEP5

  [ Aaron M. Ucko ]
  * Reinstate direct upstream changes lost in merge.
  * Ensure that apps that could potentially hit the network can use HTTPS.
    (Don't bother with anything that only supports the old Entrez1 service.)
  * Allow Entrez2 over HTTPS by switching to the Entrez2s service, making
    HTTPS connections by default, and allowing HTTPS POST redirections from
    raw IP addresses (which NCBI's certificates don't cover).
  * Let GCC take care of setting __DATE__ and __TIME__ per SOURCE_DATE_EPOCH.
  * api/sqnutil3.c: Substitute strcpy for sprintf with no extra
    arguments, which our hardening flags disallow.
  * connect/ncbi_gnutls.c: Suppress strict version check.
  * debian/*.symbols: Update for new release.
  * debian/{blast2.*,control,rules}, make/makedemo.unx: Turn blast2 into an
    architecture-independent transitional package for ncbi-blast+-legacy.
    (Retire blastcl3, which is obsolete.)
  * debian/{compat,control}: Advance to Debhelper compat level 10.
  * debian/control: Drop unversioned B-D-I on dpkg-dev left behind by cme.
  * debian/{control,rules}:
    - Build against GNU TLS.
    - Retune ncbi-data/ncbi-rrna-data split.
  * debian/libncbi6(-dev).install, make/makeshlib.unx: Account for new
    libconnssl library.
  * debian/rules:
    - Drop override_dh_strip-arch target now that -dbg packages are gone.
    - Fix typo in name of override_dh_makeshlibs-arch target from #806084.
  * debian/{rules,.gitignore}: Stop generating legacy menu files for
    non-interactive tools (already retired in favor of XDG desktop files
    for true graphical applications). 
  * debian/rules, make/make{demo,net}.unx: Substitute -Wl,--as-needed
    for manual linkage cleanups.
  * demo/tbl2asn.c: Complain about date only if failing for other reasons.
    (Closes: #821075.)
  * doc/man/blastcl3.1: Fix a stray reference to retired programs.

 -- Aaron M. Ucko <email address hidden>  Sun, 04 Dec 2016 21:33:55 -0500