r-base 4.1.2-1ubuntu1 source package in Ubuntu

Changelog

r-base (4.1.2-1ubuntu1) jammy; urgency=medium

  * Drop adding -std=gnu99, as R needs at least C11 compiler by default
    and adds -std=gnu11 which then lowers the standard than what gcc
    default is.
  * Turn off LTO as it missbuilds R with HAVE_FORTRAN_DOUBLE_COMPLEX not
    defined. LP: #1950283

 -- Dimitri John Ledkov <email address hidden>  Tue, 09 Nov 2021 12:11:18 +0000

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Uploaded by:
Dimitri John Ledkov
Uploaded to:
Jammy
Original maintainer:
Ubuntu Developers
Architectures:
any all
Section:
math
Urgency:
Medium Urgency

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Binary packages built by this source

r-base: GNU R statistical computation and graphics system

 R is a system for statistical computation and graphics. It consists
 of a language plus a run-time environment with graphics, a debugger,
 access to certain system functions, and the ability to run programs
 stored in script files.
 .
 The design of R has been heavily influenced by two existing languages:
 Becker, Chambers & Wilks' S and Sussman's Scheme. Whereas the
 resulting language is very similar in appearance to S, the underlying
 implementation and semantics are derived from Scheme.
 .
 The core of R is an interpreted computer language which allows
 branching and looping as well as modular programming using functions.
 Most of the user-visible functions in R are written in R. It is
 possible for the user to interface to procedures written in the
 C, C++, or FORTRAN languages for efficiency, and many of R's core
 functions do so. The R distribution contains functionality for a
 large number of statistical procedures and underlying applied math
 computations. There is also a large set of functions which provide
 a flexible graphical environment for creating various kinds of data
 presentations.
 .
 Additionally, several thousand extension "packages" are available from
 CRAN, the Comprehensive R Archive Network, many also as Debian packages,
 named 'r-cran-<name>'.
 .
 This package is a metapackage which eases the transition from the
 pre-1.5.0 package setup with its larger r-base package. Once installed, it
 can be safely removed and apt-get will automatically upgrade its components
 during future upgrades. Providing this package gives a way to users to
 then only install r-base-core if they so desire.

r-base-core: GNU R core of statistical computation and graphics system

 R is a system for statistical computation and graphics. It consists
 of a language plus a run-time environment with graphics, a debugger,
 access to certain system functions, and the ability to run programs
 stored in script files.
 .
 The design of R has been heavily influenced by two existing languages:
 Becker, Chambers & Wilks' S and Sussman's Scheme. Whereas the
 resulting language is very similar in appearance to S, the underlying
 implementation and semantics are derived from Scheme.
 .
 The core of R is an interpreted computer language which allows
 branching and looping as well as modular programming using functions.
 Most of the user-visible functions in R are written in R. It is
 possible for the user to interface to procedures written in the
 C, C++, or FORTRAN languages for efficiency, and many of R's core
 functions do so. The R distribution contains functionality for a
 large number of statistical procedures and underlying applied math
 computations. There is also a large set of functions which provide
 a flexible graphical environment for creating various kinds of data
 presentations.
 .
 Additionally, several thousand extension "packages" are available
 from CRAN, the Comprehensive R Archive Network, many also as Debian
 packages, named 'r-cran-<name>'.
 .
 This package provides the core GNU R system from which only the optional
 documentation packages r-base-html, r-doc-html, r-doc-pdf and r-doc-info
 have been split off to somewhat reduce the size of this package.

r-base-core-dbg: GNU R debug symbols for statistical comp. language and environment

 R is a system for statistical computation and graphics. It consists
 of a language plus a run-time environment with graphics, a debugger,
 access to certain system functions, and the ability to run programs
 stored in script files.
 .
 The design of R has been heavily influenced by two existing languages:
 Becker, Chambers & Wilks' S and Sussman's Scheme. Whereas the
 resulting language is very similar in appearance to S, the underlying
 implementation and semantics are derived from Scheme.
 .
 The core of R is an interpreted computer language which allows
 branching and looping as well as modular programming using functions.
 Most of the user-visible functions in R are written in R. It is
 possible for the user to interface to procedures written in the
 C, C++, or FORTRAN languages for efficiency, and many of R's core
 functions do so. The R distribution contains functionality for a
 large number of statistical procedures and underlying applied math
 computations. There is also a large set of functions which provide
 a flexible graphical environment for creating various kinds of data
 presentations.
 .
 Additionally, several thousand extension "packages" are available from
 CRAN, the Comprehensive R Archive Network, many also as Debian packages,
 named 'r-cran-<name>'.
 .
 This package contains debugging symbol tables for the binaries and dynamic
 libraries in the r-base-core package.

r-base-dev: GNU R installation of auxiliary GNU R packages

 R is a system for statistical computation and graphics. It consists
 of a language plus a run-time environment with graphics, a debugger,
 access to certain system functions, and the ability to run programs
 stored in script files.
 .
 The design of R has been heavily influenced by two existing languages:
 Becker, Chambers & Wilks' S and Sussman's Scheme. Whereas the
 resulting language is very similar in appearance to S, the underlying
 implementation and semantics are derived from Scheme.
 .
 The core of R is an interpreted computer language which allows
 branching and looping as well as modular programming using functions.
 Most of the user-visible functions in R are written in R. It is
 possible for the user to interface to procedures written in the
 C, C++, or FORTRAN languages for efficiency, and many of R's core
 functions do so. The R distribution contains functionality for a
 large number of statistical procedures and underlying applied math
 computations. There is also a large set of functions which provide
 a flexible graphical environment for creating various kinds of data
 presentations.
 .
 Additionally, several thousand extension "packages" are available from
 CRAN, the Comprehensive R Archive Network, many also as Debian packages,
 named 'r-cran-<name>'.
 .
 This package ensures that other Debian packages needed for installation of
 some auxiliary R packages are installed.

r-base-html: GNU R html docs for statistical computing system functions

 R is a system for statistical computation and graphics. It consists
 of a language plus a run-time environment with graphics, a debugger,
 access to certain system functions, and the ability to run programs
 stored in script files.
 .
 The design of R has been heavily influenced by two existing languages:
 Becker, Chambers & Wilks' S and Sussman's Scheme. Whereas the
 resulting language is very similar in appearance to S, the underlying
 implementation and semantics are derived from Scheme.
 .
 The core of R is an interpreted computer language which allows
 branching and looping as well as modular programming using functions.
 Most of the user-visible functions in R are written in R. It is
 possible for the user to interface to procedures written in the
 C, C++, or FORTRAN languages for efficiency, and many of R's core
 functions do so. The R distribution contains functionality for a
 large number of statistical procedures and underlying applied math
 computations. There is also a large set of functions which provide
 a flexible graphical environment for creating various kinds of data
 presentations.
 .
 Additionally, several thousand extension "packages" are available from
 CRAN, the Comprehensive R Archive Network, many also as Debian packages,
 named 'r-cran-<name>'.
 .
 This package provides html documentation suitable for browsing with a
 web-browser for the libraries included in the r-base package. It is not
 a required package as the same documentation is already included for
 on-line browsing.

r-doc-html: GNU R html manuals for statistical computing system

 R is a system for statistical computation and graphics. It consists
 of a language plus a run-time environment with graphics, a debugger,
 access to certain system functions, and the ability to run programs
 stored in script files.
 .
 The design of R has been heavily influenced by two existing languages:
 Becker, Chambers & Wilks' S and Sussman's Scheme. Whereas the
 resulting language is very similar in appearance to S, the underlying
 implementation and semantics are derived from Scheme.
 .
 The core of R is an interpreted computer language which allows
 branching and looping as well as modular programming using functions.
 Most of the user-visible functions in R are written in R. It is
 possible for the user to interface to procedures written in the
 C, C++, or FORTRAN languages for efficiency, and many of R's core
 functions do so. The R distribution contains functionality for a
 large number of statistical procedures and underlying applied math
 computations. There is also a large set of functions which provide
 a flexible graphical environment for creating various kinds of data
 presentations.
 .
 Additionally, several thousand extension "packages" are available from
 CRAN, the Comprehensive R Archive Network, many also as Debian packages,
 named 'r-cran-<name>'.
 .
 This package provides the R manuals in html format. The sibling packages
 r-doc-pdf and r-doc-info provides the same manuals.

r-doc-info: GNU R info manuals statistical computing system

 R is a system for statistical computation and graphics. It consists
 of a language plus a run-time environment with graphics, a debugger,
 access to certain system functions, and the ability to run programs
 stored in script files.
 .
 The design of R has been heavily influenced by two existing languages:
 Becker, Chambers & Wilks' S and Sussman's Scheme. Whereas the
 resulting language is very similar in appearance to S, the underlying
 implementation and semantics are derived from Scheme.
 .
 The core of R is an interpreted computer language which allows
 branching and looping as well as modular programming using functions.
 Most of the user-visible functions in R are written in R. It is
 possible for the user to interface to procedures written in the
 C, C++, or FORTRAN languages for efficiency, and many of R's core
 functions do so. The R distribution contains functionality for a
 large number of statistical procedures and underlying applied math
 computations. There is also a large set of functions which provide
 a flexible graphical environment for creating various kinds of data
 presentations.
 .
 Additionally, several thousand extension "packages" are available from
 CRAN, the Comprehensive R Archive Network, many also as Debian packages,
 named 'r-cran-<name>'.
 .
 This package provides the R manuals in info format. The sibling packages
 r-doc-html and r-doc-pdf provide the same manuals.

r-doc-pdf: GNU R pdf manuals for statistical computing system

 R is a system for statistical computation and graphics. It consists
 of a language plus a run-time environment with graphics, a debugger,
 access to certain system functions, and the ability to run programs
 stored in script files.
 .
 The design of R has been heavily influenced by two existing languages:
 Becker, Chambers & Wilks' S and Sussman's Scheme. Whereas the
 resulting language is very similar in appearance to S, the underlying
 implementation and semantics are derived from Scheme.
 .
 The core of R is an interpreted computer language which allows
 branching and looping as well as modular programming using functions.
 Most of the user-visible functions in R are written in R. It is
 possible for the user to interface to procedures written in the
 C, C++, or FORTRAN languages for efficiency, and many of R's core
 functions do so. The R distribution contains functionality for a
 large number of statistical procedures and underlying applied math
 computations. There is also a large set of functions which provide
 a flexible graphical environment for creating various kinds of data
 presentations.
 .
 Additionally, several thousand extension "packages" are available from
 CRAN, the Comprehensive R Archive Network, many also as Debian packages,
 named 'r-cran-<name>'.
 .
 This package provides the R manuals in pdf format. The sibling packages
 r-doc-html and r-doc-info provides the same manuals.

r-mathlib: GNU R standalone mathematics library

 R is a system for statistical computation and graphics. It consists
 of a language plus a run-time environment with graphics, a debugger,
 access to certain system functions, and the ability to run programs
 stored in script files.
 .
 The design of R has been heavily influenced by two existing languages:
 Becker, Chambers & Wilks' S and Sussman's Scheme. Whereas the
 resulting language is very similar in appearance to S, the underlying
 implementation and semantics are derived from Scheme.
 .
 The core of R is an interpreted computer language which allows
 branching and looping as well as modular programming using functions.
 Most of the user-visible functions in R are written in R. It is
 possible for the user to interface to procedures written in the
 C, C++, or FORTRAN languages for efficiency, and many of R's core
 functions do so. The R distribution contains functionality for a
 large number of statistical procedures and underlying applied math
 computations. There is also a large set of functions which provide
 a flexible graphical environment for creating various kinds of data
 presentations.
 .
 Additionally, several thousand extension "packages" are available from
 CRAN, the Comprehensive R Archive Network, many also as Debian packages,
 named 'r-cran-<name>'.
 .
 This package provides the libRmath shared and static libraries which can
 be called from standalone C or C++ code.

r-recommended: GNU R collection of recommended packages [metapackage]

 R is a system for statistical computation and graphics. It consists
 of a language plus a run-time environment with graphics, a debugger,
 access to certain system functions, and the ability to run programs
 stored in script files.
 .
 The design of R has been heavily influenced by two existing languages:
 Becker, Chambers & Wilks' S and Sussman's Scheme. Whereas the
 resulting language is very similar in appearance to S, the underlying
 implementation and semantics are derived from Scheme.
 .
 The core of R is an interpreted computer language which allows
 branching and looping as well as modular programming using functions.
 Most of the user-visible functions in R are written in R. It is
 possible for the user to interface to procedures written in the
 C, C++, or FORTRAN languages for efficiency, and many of R's core
 functions do so. The R distribution contains functionality for a
 large number of statistical procedures and underlying applied math
 computations. There is also a large set of functions which provide
 a flexible graphical environment for creating various kinds of data
 presentations.
 .
 Additionally, several thousand extension "packages" are available from
 CRAN, the Comprehensive R Archive Network, many also as Debian packages,
 named 'r-cran-<name>'.
 .
 This Debian package is now a metapackage that depends on a set of
 packages that are recommended by the upstream R core team as part of a
 complete R distribution, and distributed along with the source of R
 itself, as well as directly via the CRAN network of mirrors. This set
 comprises the following packages (listed in their upstream names):
  - KernSmooth: Functions for kernel smoothing for Wand & Jones (1995)
  - Matrix: Classes and methods for dense and sparse matrices and
    operations on them using Lapack and SuiteSparse
  - MASS, class, nnet and spatial: packages from Venables and Ripley,
    `Modern Applied Statistics with S' (4th edition).
  - boot: Bootstrap R (S-Plus) Functions from the book "Bootstrap Methods
    and Their Applications" by A.C. Davison and D.V. Hinkley (1997).
  - cluster: Functions for clustering (by Rousseeuw et al.)
  - codetools: Code analysis tools for R
  - foreign: Read data stored by Minitab, S, SAS, SPSS, Stata, ...
  - lattice: Implementation of Trellis (R) graphics
  - mgcv: Multiple smoothing parameter estimation and GAMs by GCV
  - nlme: Linear and nonlinear mixed effects models
  - rpart: Recursive partitioning and regression trees
  - survival: Survival analysis, including penalised likelihood.