trnascan-se 1.3.1-1 source package in Ubuntu
Changelog
trnascan-se (1.3.1-1) unstable; urgency=medium * Initial release (Closes: #803542) -- Afif Elghraoui <email address hidden> Tue, 13 Dec 2016 23:35:18 -0800
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any all
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Bionic | release | multiverse | misc |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| trnascan-se_1.3.1-1.dsc | 2.0 KiB | e872594ba672f208bb02f1de183c057e56f33ceb51d869d47c6387509cc718ae |
| trnascan-se_1.3.1.orig.tar.gz | 723.6 KiB | 862924d869453d1c111ba02f47d4cd86c7d6896ff5ec9e975f1858682282f316 |
| trnascan-se_1.3.1-1.debian.tar.xz | 6.1 KiB | 949f22149ad63040a28b5915315145c122d1a6c6506d09bf71c31ec813eb1eb5 |
No changes file available.
Binary packages built by this source
- trnascan-se: No summary available for trnascan-se in ubuntu artful.
No description available for trnascan-se in ubuntu artful.
- trnascan-se-common: detection of transfer RNA genes in genomic sequence (common files)
tRNAscan-SE identifies 99-100% of transfer RNA genes in DNA sequence while
giving less than one false positive per 15 gigabases. Two previously described
tRNA detection programs are used as fast, first-pass prefilters to identify
candidate tRNAs, which are then analyzed by a highly selective tRNA covariance
model. This work represents a practical application of RNA covariance models,
which are general, probabilistic secondary structure profiles based on
stochastic context-free grammars. tRNAscan-SE searches at ~ 30 000 bp/s.
Additional extensions to tRNAscan-SE detect unusual tRNA homologues such as
selenocysteine tRNAs, tRNA-derived repetitive elements and tRNA pseudogenes.
.
This package contains the architecture-independent common files.
- trnascan-se-dbgsym: No summary available for trnascan-se-dbgsym in ubuntu cosmic.
No description available for trnascan-se-dbgsym in ubuntu cosmic.
