Ubuntu
trnascan-se package

trnascan-se 2.0.9+ds-1 source package in Ubuntu

Changelog

trnascan-se (2.0.9+ds-1) unstable; urgency=medium

  [ Nilesh Patra ]
  * Team Upload.
  * New upstream version 2.0.9+ds
  * Declare compliance with policy 4.5.1
  * Update manpages

  [ Étienne Mollier ]
  * d/control: update uploader address

 -- Nilesh Patra <email address hidden>  Sun, 15 Aug 2021 19:03:59 +0530

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
any all
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Kinetic release multiverse misc
Jammy release multiverse misc

Downloads

File Size SHA-256 Checksum
trnascan-se_2.0.9+ds-1.dsc 2.1 KiB 6ef6ba95798bda4e498f48e4904c6f9a76a2fc962b54d1b23a8bb55c2d21abb6
trnascan-se_2.0.9+ds.orig.tar.gz 4.0 MiB 2bf16934c11db13102145c82f03909ac7ca765621e9fdfd4e0cae3cf8066a3a9
trnascan-se_2.0.9+ds-1.debian.tar.xz 11.0 KiB f39af94e9135ce8b547c16c3f17891d6520092a53df4d9f36f587e05a422c542

Available diffs

No changes file available.

Binary packages built by this source

trnascan-se: detection of transfer RNA genes in genomic sequence

 tRNAscan-SE identifies 99-100% of transfer RNA genes in DNA sequence while
 giving less than one false positive per 15 gigabases. Two previously described
 tRNA detection programs are used as fast, first-pass prefilters to identify
 candidate tRNAs, which are then analyzed by a highly selective tRNA covariance
 model. This work represents a practical application of RNA covariance models,
 which are general, probabilistic secondary structure profiles based on
 stochastic context-free grammars. tRNAscan-SE searches at ~ 30 000 bp/s.
 Additional extensions to tRNAscan-SE detect unusual tRNA homologues such as
 selenocysteine tRNAs, tRNA-derived repetitive elements and tRNA pseudogenes.

trnascan-se-common: detection of transfer RNA genes in genomic sequence (common files)

 tRNAscan-SE identifies 99-100% of transfer RNA genes in DNA sequence while
 giving less than one false positive per 15 gigabases. Two previously described
 tRNA detection programs are used as fast, first-pass prefilters to identify
 candidate tRNAs, which are then analyzed by a highly selective tRNA covariance
 model. This work represents a practical application of RNA covariance models,
 which are general, probabilistic secondary structure profiles based on
 stochastic context-free grammars. tRNAscan-SE searches at ~ 30 000 bp/s.
 Additional extensions to tRNAscan-SE detect unusual tRNA homologues such as
 selenocysteine tRNAs, tRNA-derived repetitive elements and tRNA pseudogenes.
 .
 This package contains the architecture-independent common files.

trnascan-se-dbgsym: debug symbols for trnascan-se