r-bioc-grohmm binary package in Ubuntu Mantic ppc64el

 This BioConductor package provides a pipeline for the analysis of GRO-
 seq data. Among the more advanced features, r-bioc-grohmm predicts the
 boundaries of transcriptional activity across the genome de novo using a
 two-state hidden Markov model (HMM).
 .
 The used model essentially divides the genome into transcribed and non-
 transcribed regions in a strand specific manner. HMMs are used to
 identify the leading edge of Pol II at genes activated by a stimulus in
 GRO-seq time course data. This approach allows the genome-wide
 interrogation of transcription rates in cells.

Publishing history

Date Status Target Pocket Component Section Priority Phased updates Version
  2023-08-15 13:47:51 UTC Published Ubuntu Mantic ppc64el release universe gnu-r Optional 1.34.0-1
  • Published
  • Copied from ubuntu mantic-proposed ppc64el in Primary Archive for Ubuntu
  Deleted Ubuntu Mantic ppc64el proposed universe gnu-r Optional 1.34.0-1
  • Removal requested .
  • Deleted by Ubuntu Archive Auto-Sync

    Moved to mantic

  • Published
  2023-08-15 13:48:46 UTC Superseded Ubuntu Mantic ppc64el release universe gnu-r Optional 1.32.0-1
  • Removal requested .
  • Superseded by ppc64el build of r-bioc-grohmm 1.34.0-1 in ubuntu mantic PROPOSED
  • Published
  • Copied from ubuntu lunar-proposed ppc64el in Primary Archive for Ubuntu